Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 SAMD11P1-201ENST00000571429 661 ntBASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
MKKSQ9NPJ1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 MSTO2P-201ENST00000314835 1709 ntBASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 AC092933.1-201ENST00000393644 945 ntBASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 PRSS30P-206ENST00000641773 873 ntBASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.47□□□□□ -0.09
MKKSQ9NPJ1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 KRT8P35-201ENST00000483942 1338 ntBASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 C2orf27AP3-201ENST00000434123 579 ntBASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 AC016694.1-201ENST00000434179 700 ntBASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 AC022210.1-201ENST00000449856 793 ntBASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 CROCCP4-201ENST00000457096 498 ntBASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 AP005482.1-201ENST00000563722 1273 ntBASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 AL008721.1-201ENST00000609964 604 ntBASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 AL354718.3-201ENST00000616414 581 ntBASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 CR382287.1-201ENST00000623954 586 ntBASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms