Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 SAMD11P1-201ENST00000571429 661 ntBASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 AL158212.4-201ENST00000624062 1286 ntBASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.48□□□□□ -0.09
NEUROD4Q9HD90 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 TSSK5P-201ENST00000423978 907 ntBASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 GAPDHP21-201ENST00000450301 1010 ntBASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 MEIS3P1-201ENST00000495167 958 ntBASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 AC007787.1-201ENST00000588095 1583 ntBASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NEUROD4Q9HD90 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms