Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 RN7SKP175-201ENST00000408472 289 ntBASIC16.56■□□□□ 0.24
HIPK3Q9H422 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 NOC2LP1-201ENST00000450578 752 ntBASIC16.56■□□□□ 0.24
HIPK3Q9H422 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 AP003680.1-201ENST00000598970 3660 ntBASIC16.56■□□□□ 0.24
HIPK3Q9H422 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 SHC1P1-201ENST00000425230 1745 ntBASIC16.56■□□□□ 0.24
HIPK3Q9H422 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 AC098935.1-201ENST00000446057 611 ntBASIC16.55■□□□□ 0.24
HIPK3Q9H422 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 AC242376.1-201ENST00000559033 726 ntBASIC16.55■□□□□ 0.24
HIPK3Q9H422 SNORD3B-2-202ENST00000571722 791 ntBASIC16.55■□□□□ 0.24
HIPK3Q9H422 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 AC103691.2-201ENST00000618824 433 ntBASIC16.55■□□□□ 0.24
HIPK3Q9H422 AC011491.1-203ENST00000637688 543 ntBASIC16.55■□□□□ 0.24
HIPK3Q9H422 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIPK3Q9H422 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.55■□□□□ 0.24
HIPK3Q9H422 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HIPK3Q9H422 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.54■□□□□ 0.24
HIPK3Q9H422 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.54■□□□□ 0.24
HIPK3Q9H422 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HIPK3Q9H422 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK3Q9H422 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HIPK3Q9H422 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK3Q9H422 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK3Q9H422 AL662844.4-201ENST00000606367 2838 ntBASIC16.54■□□□□ 0.24
HIPK3Q9H422 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK3Q9H422 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK3Q9H422 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK3Q9H422 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HIPK3Q9H422 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK3Q9H422 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK3Q9H422 AC026316.1-201ENST00000398900 414 ntBASIC16.54■□□□□ 0.24
HIPK3Q9H422 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.54■□□□□ 0.24
HIPK3Q9H422 RCC2P8-201ENST00000502779 1035 ntBASIC16.54■□□□□ 0.24
HIPK3Q9H422 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIPK3Q9H422 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.54■□□□□ 0.24
HIPK3Q9H422 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.54■□□□□ 0.24
HIPK3Q9H422 DUX4L46-201ENST00000566845 751 ntBASIC16.54■□□□□ 0.24
HIPK3Q9H422 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.54■□□□□ 0.24
HIPK3Q9H422 AL132994.2-201ENST00000603120 687 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms