Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 AC055876.3-201ENST00000431496 288 ntBASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 AC004890.2-204ENST00000481968 304 ntBASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 AC138649.4-201ENST00000612222 287 ntBASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPF3BQ9BZI7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 AC135586.1-201ENST00000539323 574 ntBASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
UPF3BQ9BZI7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms