Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 AC004987.2-201ENST00000395959 1148 ntBASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 RCN1P1-201ENST00000400413 996 ntBASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 GHSR-202ENST00000427970 912 ntBASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 KRT16P4-201ENST00000453883 522 ntBASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 AC138894.3-201ENST00000603787 634 ntBASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 AC008667.4-201ENST00000607370 168 ntBASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 AC012306.2-201ENST00000609350 630 ntBASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
SEC22CQ9BRL7 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 AC015909.5-201ENST00000624336 2266 ntBASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 TPT1P11-201ENST00000458482 498 ntBASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 OR7E47P-204ENST00000575924 449 ntBASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 AC097359.3-201ENST00000603982 1210 ntBASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SEC22CQ9BRL7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms