Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 FAM58BP-201ENST00000439056 645 ntBASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 AC005740.2-201ENST00000511085 419 ntBASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 AC084346.2-201ENST00000607097 949 ntBASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 RPL18P13-201ENST00000478088 569 ntBASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 AC106872.11-201ENST00000605838 421 ntBASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 AP000346.4-201ENST00000614827 381 ntBASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 TMBIM7P-202ENST00000641474 1516 ntBASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP2Q96SN8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 AL662890.1-201ENST00000396818 632 ntBASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 EEF1DP6-201ENST00000449232 372 ntBASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 AC021723.1-201ENST00000486306 515 ntBASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP2Q96SN8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms