Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 RPSAP31-201ENST00000416648 895 ntBASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 AC087045.2-201ENST00000606279 1003 ntBASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 AL157813.1-201ENST00000612996 587 ntBASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 RN7SL736P-201ENST00000613111 269 ntBASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRAMP1Q96RY5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 RN7SL67P-201ENST00000492147 296 ntBASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 FAM90A2P-201ENST00000511144 1395 ntBASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 FAM90A25P-201ENST00000528404 1395 ntBASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 AC092171.5-201ENST00000608012 942 ntBASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRAMP1Q96RY5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 OR2K2-202ENST00000374428 1038 ntBASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 AL645933.1-201ENST00000440087 609 ntBASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 MEG3_2.1-201ENST00000611456 105 ntBASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CRAMP1Q96RY5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms