Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 ZBED1P1-201ENST00000502364 1930 ntBASIC14.51□□□□□ -0.09
COL21A1Q96P44 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 AC092337.1-201ENST00000568699 1129 ntBASIC14.5□□□□□ -0.09
COL21A1Q96P44 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 AF228730.6-201ENST00000641497 218 ntBASIC14.5□□□□□ -0.09
COL21A1Q96P44 AC084121.3-201ENST00000641716 218 ntBASIC14.5□□□□□ -0.09
COL21A1Q96P44 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL21A1Q96P44 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.5□□□□□ -0.09
COL21A1Q96P44 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.49□□□□□ -0.09
COL21A1Q96P44 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms