Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CHAMP1Q96JM3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 AC104457.1-201ENST00000401024 814 ntBASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 YBX1P5-201ENST00000509441 847 ntBASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 AL589739.1-201ENST00000607720 493 ntBASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 AC138969.3-201ENST00000546612 1459 ntBASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 AC138932.2-201ENST00000548268 1459 ntBASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 AC126755.4-201ENST00000549796 1459 ntBASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 AC012508.2-201ENST00000567613 1472 ntBASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHAMP1Q96JM3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 AC012617.1-204ENST00000586340 2305 ntBASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 AL033527.5-202ENST00000641632 1098 ntBASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHAMP1Q96JM3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 LILRP1-201ENST00000444199 1370 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms