Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 AC133539.2-201ENST00000604757 467 ntBASIC18.18■□□□□ 0.5
DDX11Q96FC9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX11Q96FC9 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
DDX11Q96FC9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 KRT8P22-201ENST00000562317 1415 ntBASIC18.17■□□□□ 0.5
DDX11Q96FC9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX11Q96FC9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DDX11Q96FC9 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 AC099063.4-201ENST00000641099 1602 ntBASIC18.16■□□□□ 0.5
DDX11Q96FC9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 AL442647.2-201ENST00000429864 857 ntBASIC18.16■□□□□ 0.5
DDX11Q96FC9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms