Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL137783.1-201ENST00000623494 1896 ntBASIC16.22■□□□□ 0.19
DDX1Q92499 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
DDX1Q92499 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 AC023908.3-201ENST00000564211 3047 ntBASIC16.22■□□□□ 0.19
DDX1Q92499 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
DDX1Q92499 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.22■□□□□ 0.19
DDX1Q92499 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 AC007389.4-201ENST00000454674 793 ntBASIC16.22■□□□□ 0.19
DDX1Q92499 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.22■□□□□ 0.19
DDX1Q92499 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.22■□□□□ 0.19
DDX1Q92499 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.22■□□□□ 0.19
DDX1Q92499 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
DDX1Q92499 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.22■□□□□ 0.19
DDX1Q92499 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.22■□□□□ 0.19
DDX1Q92499 AC007431.3-201ENST00000623221 587 ntBASIC16.22■□□□□ 0.19
DDX1Q92499 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 MTHFR-210ENST00000641407 2387 ntBASIC16.22■□□□□ 0.19
DDX1Q92499 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DDX1Q92499 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.22■□□□□ 0.19
DDX1Q92499 AC140479.7-201ENST00000636301 2332 ntBASIC16.22■□□□□ 0.19
DDX1Q92499 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.21■□□□□ 0.19
DDX1Q92499 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
DDX1Q92499 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
DDX1Q92499 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
DDX1Q92499 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.21■□□□□ 0.19
DDX1Q92499 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
DDX1Q92499 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
DDX1Q92499 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.21■□□□□ 0.19
DDX1Q92499 ELK2AP-201ENST00000392510 1007 ntBASIC16.21■□□□□ 0.19
DDX1Q92499 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.21■□□□□ 0.19
DDX1Q92499 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.21■□□□□ 0.19
DDX1Q92499 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.21■□□□□ 0.19
DDX1Q92499 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.21■□□□□ 0.19
DDX1Q92499 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
DDX1Q92499 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.21■□□□□ 0.19
DDX1Q92499 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.21■□□□□ 0.19
DDX1Q92499 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.21■□□□□ 0.19
DDX1Q92499 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DDX1Q92499 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
DDX1Q92499 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
DDX1Q92499 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.2■□□□□ 0.18
DDX1Q92499 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
DDX1Q92499 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.2■□□□□ 0.18
DDX1Q92499 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms