Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 NUS1P2-201ENST00000417358 873 ntBASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 AC132008.2-207ENST00000454517 770 ntBASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 AC006557.2-201ENST00000592985 1240 ntBASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 AC099336.1-202ENST00000602961 463 ntBASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CROCCP3Q8IVE0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CROCCP3Q8IVE0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
CROCCP3Q8IVE0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
CROCCP3Q8IVE0 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 AC016397.2-201ENST00000624848 1985 ntBASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 AC104076.2-201ENST00000448912 469 ntBASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 TPT1P11-201ENST00000458482 498 ntBASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 PCDHB18P-202ENST00000526308 3197 ntBASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.89□□□□□ -0.19
CROCCP3Q8IVE0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms