Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 AL031432.2-201ENST00000566714 459 ntBASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 AL928711.1-201ENST00000570165 459 ntBASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 AL645728.2-201ENST00000641974 660 ntBASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 AC131902.2-201ENST00000566892 2172 ntBASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 KRT18P31-201ENST00000506277 1292 ntBASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 AC002347.1-201ENST00000569543 541 ntBASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 REXO1L6P-202ENST00000619970 1078 ntBASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 AC004790.2-201ENST00000623588 572 ntBASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LYSMD2Q8IV50 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms