Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 AC211486.1-202ENST00000416371 468 ntBASIC15.43■□□□□ 0.06
RAPH1Q70E73 BX842568.4-201ENST00000421222 227 ntBASIC15.43■□□□□ 0.06
RAPH1Q70E73 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 AC211476.1-201ENST00000503899 468 ntBASIC15.43■□□□□ 0.06
RAPH1Q70E73 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.43■□□□□ 0.06
RAPH1Q70E73 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAPH1Q70E73 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 ACE3P-201ENST00000423435 1973 ntBASIC15.42■□□□□ 0.06
RAPH1Q70E73 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 FAM8A3P-201ENST00000427218 844 ntBASIC15.42■□□□□ 0.06
RAPH1Q70E73 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 AC015910.1-201ENST00000579400 975 ntBASIC15.42■□□□□ 0.06
RAPH1Q70E73 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 AP001059.3-201ENST00000619053 235 ntBASIC15.42■□□□□ 0.06
RAPH1Q70E73 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms