Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.76■□□□□ 0.27
KCNA1Q09470 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.76■□□□□ 0.27
KCNA1Q09470 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.76■□□□□ 0.27
KCNA1Q09470 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.76■□□□□ 0.27
KCNA1Q09470 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.76■□□□□ 0.27
KCNA1Q09470 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
KCNA1Q09470 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
KCNA1Q09470 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KCNA1Q09470 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
KCNA1Q09470 AC027307.3-201ENST00000594262 1100 ntBASIC16.76■□□□□ 0.27
KCNA1Q09470 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.76■□□□□ 0.27
KCNA1Q09470 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.76■□□□□ 0.27
KCNA1Q09470 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 CICP23-201ENST00000605013 2741 ntBASIC16.76■□□□□ 0.27
KCNA1Q09470 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.76■□□□□ 0.27
KCNA1Q09470 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.76■□□□□ 0.27
KCNA1Q09470 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
KCNA1Q09470 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KCNA1Q09470 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
KCNA1Q09470 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
KCNA1Q09470 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 AL139094.1-201ENST00000405549 1188 ntBASIC16.75■□□□□ 0.27
KCNA1Q09470 NME2P1-201ENST00000426182 414 ntBASIC16.75■□□□□ 0.27
KCNA1Q09470 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 AP001063.1-201ENST00000568332 529 ntBASIC16.75■□□□□ 0.27
KCNA1Q09470 MIR5189-201ENST00000577370 114 ntBASIC16.75■□□□□ 0.27
KCNA1Q09470 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.75■□□□□ 0.27
KCNA1Q09470 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
KCNA1Q09470 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.75■□□□□ 0.27
KCNA1Q09470 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.75■□□□□ 0.27
KCNA1Q09470 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
KCNA1Q09470 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
KCNA1Q09470 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KCNA1Q09470 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.75■□□□□ 0.27
KCNA1Q09470 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.75■□□□□ 0.27
KCNA1Q09470 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
KCNA1Q09470 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KCNA1Q09470 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.74■□□□□ 0.27
KCNA1Q09470 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.74■□□□□ 0.27
KCNA1Q09470 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.74■□□□□ 0.27
KCNA1Q09470 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KCNA1Q09470 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.74■□□□□ 0.27
KCNA1Q09470 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.74■□□□□ 0.27
KCNA1Q09470 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.74■□□□□ 0.27
KCNA1Q09470 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.74■□□□□ 0.27
KCNA1Q09470 AL645937.2-201ENST00000396808 931 ntBASIC16.74■□□□□ 0.27
KCNA1Q09470 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.74■□□□□ 0.27
KCNA1Q09470 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.74■□□□□ 0.27
KCNA1Q09470 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
KCNA1Q09470 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KCNA1Q09470 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.74■□□□□ 0.27
KCNA1Q09470 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.74■□□□□ 0.27
KCNA1Q09470 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms