Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.3□□□□□ -0.28
UBA52P62987 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 GPAA1P2-202ENST00000606848 1787 ntBASIC13.3□□□□□ -0.28
UBA52P62987 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.29□□□□□ -0.28
UBA52P62987 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.29□□□□□ -0.28
UBA52P62987 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.29□□□□□ -0.28
UBA52P62987 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
UBA52P62987 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.29□□□□□ -0.28
UBA52P62987 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
UBA52P62987 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
UBA52P62987 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 OR8S1-201ENST00000310194 1080 ntBASIC13.29□□□□□ -0.28
UBA52P62987 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.29□□□□□ -0.28
UBA52P62987 TSSK5P-201ENST00000423978 907 ntBASIC13.29□□□□□ -0.28
UBA52P62987 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.29□□□□□ -0.28
UBA52P62987 KRT18P34-201ENST00000488218 1270 ntBASIC13.29□□□□□ -0.28
UBA52P62987 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.29□□□□□ -0.28
UBA52P62987 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
UBA52P62987 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
UBA52P62987 AC007967.4-201ENST00000614700 386 ntBASIC13.29□□□□□ -0.28
UBA52P62987 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
UBA52P62987 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UBA52P62987 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.29□□□□□ -0.28
UBA52P62987 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.29□□□□□ -0.28
UBA52P62987 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.29□□□□□ -0.28
UBA52P62987 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.29□□□□□ -0.28
UBA52P62987 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 KRT8P39-201ENST00000396270 1433 ntBASIC13.29□□□□□ -0.28
UBA52P62987 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.29□□□□□ -0.28
UBA52P62987 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBA52P62987 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 AP3S2-216ENST00000617003 1561 ntBASIC13.28□□□□□ -0.28
UBA52P62987 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.28□□□□□ -0.28
UBA52P62987 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
UBA52P62987 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UBA52P62987 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UBA52P62987 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.28□□□□□ -0.28
UBA52P62987 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.28□□□□□ -0.28
UBA52P62987 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 NME2P1-201ENST00000426182 414 ntBASIC13.28□□□□□ -0.28
UBA52P62987 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.28□□□□□ -0.28
UBA52P62987 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.28□□□□□ -0.28
UBA52P62987 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.28□□□□□ -0.28
UBA52P62987 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.28□□□□□ -0.28
UBA52P62987 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBA52P62987 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.28□□□□□ -0.28
UBA52P62987 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.28□□□□□ -0.28
UBA52P62987 AL008721.1-201ENST00000609964 604 ntBASIC13.28□□□□□ -0.28
UBA52P62987 AL138828.2-201ENST00000615812 383 ntBASIC13.28□□□□□ -0.28
UBA52P62987 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UBA52P62987 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.28□□□□□ -0.28
UBA52P62987 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBA52P62987 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms