Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.43□□□□□ -0.1
RPS3AP61247 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RPS3AP61247 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS3AP61247 RPL37AP1-201ENST00000412502 279 ntBASIC14.43□□□□□ -0.1
RPS3AP61247 BCRP1-201ENST00000444246 691 ntBASIC14.43□□□□□ -0.1
RPS3AP61247 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS3AP61247 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.43□□□□□ -0.1
RPS3AP61247 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.43□□□□□ -0.1
RPS3AP61247 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.43□□□□□ -0.1
RPS3AP61247 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.43□□□□□ -0.1
RPS3AP61247 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.43□□□□□ -0.1
RPS3AP61247 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RPS3AP61247 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS3AP61247 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS3AP61247 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RPS3AP61247 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
RPS3AP61247 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RPS3AP61247 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.43□□□□□ -0.1
RPS3AP61247 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RPS3AP61247 CYP4F24P-201ENST00000586049 1580 ntBASIC14.43□□□□□ -0.1
RPS3AP61247 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RPS3AP61247 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.42□□□□□ -0.1
RPS3AP61247 AL691432.1-201ENST00000596308 1422 ntBASIC14.42□□□□□ -0.1
RPS3AP61247 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.42□□□□□ -0.1
RPS3AP61247 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RPS3AP61247 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.42□□□□□ -0.1
RPS3AP61247 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.42□□□□□ -0.1
RPS3AP61247 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RPS3AP61247 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 AL080243.2-201ENST00000418783 582 ntBASIC14.42□□□□□ -0.1
RPS3AP61247 FAM8A3P-201ENST00000427218 844 ntBASIC14.42□□□□□ -0.1
RPS3AP61247 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.42□□□□□ -0.1
RPS3AP61247 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.42□□□□□ -0.1
RPS3AP61247 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.42□□□□□ -0.1
RPS3AP61247 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.42□□□□□ -0.1
RPS3AP61247 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.42□□□□□ -0.1
RPS3AP61247 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS3AP61247 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS3AP61247 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.42□□□□□ -0.1
RPS3AP61247 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
RPS3AP61247 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms