Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 RPL17P11-201ENST00000417593 544 ntBASIC14.62□□□□□ -0.07
CLDN6P56747 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 FTLP1-201ENST00000449155 526 ntBASIC14.62□□□□□ -0.07
CLDN6P56747 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.62□□□□□ -0.07
CLDN6P56747 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLDN6P56747 AP000346.4-201ENST00000614827 381 ntBASIC14.62□□□□□ -0.07
CLDN6P56747 AC022748.3-201ENST00000621828 275 ntBASIC14.62□□□□□ -0.07
CLDN6P56747 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN6P56747 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN6P56747 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
CLDN6P56747 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CLDN6P56747 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN6P56747 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CLDN6P56747 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN6P56747 HYMAI-201ENST00000635591 3347 ntBASIC14.62□□□□□ -0.07
CLDN6P56747 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CLDN6P56747 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN6P56747 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CLDN6P56747 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN6P56747 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN6P56747 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CLDN6P56747 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CLDN6P56747 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.61□□□□□ -0.07
CLDN6P56747 AC104073.2-201ENST00000453737 312 ntBASIC14.61□□□□□ -0.07
CLDN6P56747 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.61□□□□□ -0.07
CLDN6P56747 MIR3147-201ENST00000577811 66 ntBASIC14.61□□□□□ -0.07
CLDN6P56747 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.61□□□□□ -0.07
CLDN6P56747 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 AP003419.4-201ENST00000616071 517 ntBASIC14.61□□□□□ -0.07
CLDN6P56747 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN6P56747 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CLDN6P56747 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN6P56747 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
CLDN6P56747 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CLDN6P56747 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN6P56747 KRT8P14-201ENST00000414254 1442 ntBASIC14.6□□□□□ -0.07
CLDN6P56747 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN6P56747 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN6P56747 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.6□□□□□ -0.07
CLDN6P56747 AL354877.1-201ENST00000424412 413 ntBASIC14.6□□□□□ -0.07
CLDN6P56747 CHMP1AP1-201ENST00000445563 662 ntBASIC14.6□□□□□ -0.07
CLDN6P56747 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.6□□□□□ -0.07
CLDN6P56747 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN6P56747 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN6P56747 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN6P56747 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN6P56747 AC106820.3-201ENST00000561653 397 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms