Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.43■□□□□ 0.06
WNT3AP56704 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.43■□□□□ 0.06
WNT3AP56704 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
WNT3AP56704 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3AP56704 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3AP56704 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.43■□□□□ 0.06
WNT3AP56704 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3AP56704 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
WNT3AP56704 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.43■□□□□ 0.06
WNT3AP56704 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
WNT3AP56704 AL161772.1-201ENST00000610494 4412 ntBASIC15.42■□□□□ 0.06
WNT3AP56704 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.42■□□□□ 0.06
WNT3AP56704 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.42■□□□□ 0.06
WNT3AP56704 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
WNT3AP56704 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.42■□□□□ 0.06
WNT3AP56704 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
WNT3AP56704 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
WNT3AP56704 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.42■□□□□ 0.06
WNT3AP56704 DGCR5-201ENST00000399539 862 ntBASIC15.42■□□□□ 0.06
WNT3AP56704 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.42■□□□□ 0.06
WNT3AP56704 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 CRB3P1-201ENST00000449338 276 ntBASIC15.42■□□□□ 0.06
WNT3AP56704 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.42■□□□□ 0.06
WNT3AP56704 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.42■□□□□ 0.06
WNT3AP56704 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.42■□□□□ 0.06
WNT3AP56704 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.42■□□□□ 0.06
WNT3AP56704 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
WNT3AP56704 AC005252.2-201ENST00000624630 1141 ntBASIC15.42■□□□□ 0.06
WNT3AP56704 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.42■□□□□ 0.06
WNT3AP56704 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.42■□□□□ 0.06
WNT3AP56704 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
WNT3AP56704 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
WNT3AP56704 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.42■□□□□ 0.06
WNT3AP56704 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
WNT3AP56704 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
WNT3AP56704 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
WNT3AP56704 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.42■□□□□ 0.06
WNT3AP56704 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
WNT3AP56704 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.41■□□□□ 0.06
WNT3AP56704 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
WNT3AP56704 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
WNT3AP56704 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
WNT3AP56704 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.41■□□□□ 0.06
WNT3AP56704 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.41■□□□□ 0.06
WNT3AP56704 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
WNT3AP56704 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
WNT3AP56704 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.41■□□□□ 0.06
WNT3AP56704 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
WNT3AP56704 AC106881.1-201ENST00000605849 3329 ntBASIC15.41■□□□□ 0.06
WNT3AP56704 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
WNT3AP56704 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
WNT3AP56704 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.41■□□□□ 0.06
WNT3AP56704 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
WNT3AP56704 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
WNT3AP56704 ENPP7P5-201ENST00000541031 1031 ntBASIC15.41■□□□□ 0.06
WNT3AP56704 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.41■□□□□ 0.06
WNT3AP56704 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.41■□□□□ 0.06
WNT3AP56704 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.41■□□□□ 0.06
WNT3AP56704 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
WNT3AP56704 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms