Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.63□□□□□ -0.23
GFRA1P56159 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.63□□□□□ -0.23
GFRA1P56159 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.63□□□□□ -0.23
GFRA1P56159 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
GFRA1P56159 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
GFRA1P56159 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GFRA1P56159 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.63□□□□□ -0.23
GFRA1P56159 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.63□□□□□ -0.23
GFRA1P56159 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.63□□□□□ -0.23
GFRA1P56159 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GFRA1P56159 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.63□□□□□ -0.23
GFRA1P56159 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 AC004466.1-201ENST00000599515 1080 ntBASIC13.63□□□□□ -0.23
GFRA1P56159 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.63□□□□□ -0.23
GFRA1P56159 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.63□□□□□ -0.23
GFRA1P56159 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.63□□□□□ -0.23
GFRA1P56159 AC073347.1-201ENST00000421633 2643 ntBASIC13.63□□□□□ -0.23
GFRA1P56159 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.63□□□□□ -0.23
GFRA1P56159 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.63□□□□□ -0.23
GFRA1P56159 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GFRA1P56159 AC013268.4-201ENST00000637413 2228 ntBASIC13.63□□□□□ -0.23
GFRA1P56159 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GFRA1P56159 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.63□□□□□ -0.23
GFRA1P56159 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
GFRA1P56159 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
GFRA1P56159 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GFRA1P56159 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GFRA1P56159 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GFRA1P56159 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.62□□□□□ -0.23
GFRA1P56159 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.62□□□□□ -0.23
GFRA1P56159 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GFRA1P56159 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 MIR1202-201ENST00000408529 83 ntBASIC13.62□□□□□ -0.23
GFRA1P56159 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.62□□□□□ -0.23
GFRA1P56159 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.62□□□□□ -0.23
GFRA1P56159 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.62□□□□□ -0.23
GFRA1P56159 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
GFRA1P56159 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.62□□□□□ -0.23
GFRA1P56159 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.62□□□□□ -0.23
GFRA1P56159 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 AL354989.2-201ENST00000435838 1540 ntBASIC13.62□□□□□ -0.23
GFRA1P56159 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
GFRA1P56159 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GFRA1P56159 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 TUBB1P2-201ENST00000422712 1306 ntBASIC13.62□□□□□ -0.23
GFRA1P56159 TUBB1P1-201ENST00000503144 1300 ntBASIC13.62□□□□□ -0.23
GFRA1P56159 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GFRA1P56159 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.61□□□□□ -0.23
GFRA1P56159 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.61□□□□□ -0.23
GFRA1P56159 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.61□□□□□ -0.23
GFRA1P56159 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.61□□□□□ -0.23
GFRA1P56159 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.61□□□□□ -0.23
GFRA1P56159 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.61□□□□□ -0.23
GFRA1P56159 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.61□□□□□ -0.23
GFRA1P56159 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.61□□□□□ -0.23
GFRA1P56159 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms