Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.39■□□□□ 0.21
VCPP55072 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VCPP55072 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VCPP55072 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
VCPP55072 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.39■□□□□ 0.21
VCPP55072 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.39■□□□□ 0.21
VCPP55072 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 MIR326-201ENST00000362220 95 ntBASIC16.39■□□□□ 0.21
VCPP55072 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.39■□□□□ 0.21
VCPP55072 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.39■□□□□ 0.21
VCPP55072 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 KRT18P64-201ENST00000434946 1219 ntBASIC16.39■□□□□ 0.21
VCPP55072 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 PHKG1P2-201ENST00000457537 863 ntBASIC16.39■□□□□ 0.21
VCPP55072 FTH1P14-201ENST00000482930 551 ntBASIC16.39■□□□□ 0.21
VCPP55072 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.39■□□□□ 0.21
VCPP55072 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.39■□□□□ 0.21
VCPP55072 AC068587.3-201ENST00000526613 355 ntBASIC16.39■□□□□ 0.21
VCPP55072 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VCPP55072 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VCPP55072 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.39■□□□□ 0.21
VCPP55072 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.39■□□□□ 0.21
VCPP55072 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.39■□□□□ 0.21
VCPP55072 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
VCPP55072 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VCPP55072 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.39■□□□□ 0.21
VCPP55072 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.39■□□□□ 0.21
VCPP55072 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VCPP55072 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.39■□□□□ 0.21
VCPP55072 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
VCPP55072 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.39■□□□□ 0.21
VCPP55072 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCPP55072 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
VCPP55072 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VCPP55072 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.38■□□□□ 0.21
VCPP55072 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.38■□□□□ 0.21
VCPP55072 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.38■□□□□ 0.21
VCPP55072 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.38■□□□□ 0.21
VCPP55072 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 AL442647.2-201ENST00000429864 857 ntBASIC16.38■□□□□ 0.21
VCPP55072 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.38■□□□□ 0.21
VCPP55072 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.38■□□□□ 0.21
VCPP55072 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.38■□□□□ 0.21
VCPP55072 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.38■□□□□ 0.21
VCPP55072 FAM86HP-204ENST00000513466 959 ntBASIC16.38■□□□□ 0.21
VCPP55072 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.38■□□□□ 0.21
VCPP55072 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.38■□□□□ 0.21
VCPP55072 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.38■□□□□ 0.21
VCPP55072 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.38■□□□□ 0.21
VCPP55072 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.38■□□□□ 0.21
VCPP55072 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.38■□□□□ 0.21
VCPP55072 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.38■□□□□ 0.21
VCPP55072 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.38■□□□□ 0.21
VCPP55072 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.38■□□□□ 0.21
VCPP55072 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.38■□□□□ 0.21
VCPP55072 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.38■□□□□ 0.21
VCPP55072 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
VCPP55072 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.38■□□□□ 0.21
VCPP55072 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VCPP55072 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCPP55072 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCPP55072 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.37■□□□□ 0.21
VCPP55072 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VCPP55072 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.37■□□□□ 0.21
VCPP55072 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCPP55072 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.37■□□□□ 0.21
VCPP55072 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCPP55072 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VCPP55072 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
VCPP55072 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.37■□□□□ 0.21
VCPP55072 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms