Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB3BP20337 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB3BP20337 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RAB3BP20337 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RAB3BP20337 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
RAB3BP20337 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.44□□□□□ -0.26
RAB3BP20337 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.44□□□□□ -0.26
RAB3BP20337 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.44□□□□□ -0.26
RAB3BP20337 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.44□□□□□ -0.26
RAB3BP20337 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.44□□□□□ -0.26
RAB3BP20337 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 AP002472.1-201ENST00000577490 586 ntBASIC13.44□□□□□ -0.26
RAB3BP20337 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.44□□□□□ -0.26
RAB3BP20337 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RAB3BP20337 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
RAB3BP20337 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RAB3BP20337 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 AC055811.4-201ENST00000624039 1754 ntBASIC13.44□□□□□ -0.26
RAB3BP20337 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RAB3BP20337 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.44□□□□□ -0.26
RAB3BP20337 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RAB3BP20337 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB3BP20337 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
RAB3BP20337 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB3BP20337 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB3BP20337 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.43□□□□□ -0.26
RAB3BP20337 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB3BP20337 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB3BP20337 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB3BP20337 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RAB3BP20337 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.43□□□□□ -0.26
RAB3BP20337 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB3BP20337 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB3BP20337 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RAB3BP20337 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RAB3BP20337 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB3BP20337 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB3BP20337 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.43□□□□□ -0.26
RAB3BP20337 TPT1P11-201ENST00000458482 498 ntBASIC13.43□□□□□ -0.26
RAB3BP20337 AC074386.1-202ENST00000463561 864 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms