Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM21P19474 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM21P19474 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 AC005089.1-201ENST00000619486 2241 ntBASIC16.92■□□□□ 0.3
TRIM21P19474 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM21P19474 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM21P19474 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM21P19474 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.92■□□□□ 0.3
TRIM21P19474 AL512361.1-201ENST00000554200 418 ntBASIC16.92■□□□□ 0.3
TRIM21P19474 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.92■□□□□ 0.3
TRIM21P19474 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
TRIM21P19474 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM21P19474 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.92■□□□□ 0.3
TRIM21P19474 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM21P19474 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM21P19474 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM21P19474 AC007191.1-201ENST00000623179 2995 ntBASIC16.92■□□□□ 0.3
TRIM21P19474 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM21P19474 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM21P19474 CICP14-201ENST00000629111 2732 ntBASIC16.91■□□□□ 0.3
TRIM21P19474 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM21P19474 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM21P19474 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.91■□□□□ 0.3
TRIM21P19474 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM21P19474 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRIM21P19474 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TRIM21P19474 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM21P19474 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM21P19474 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM21P19474 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRIM21P19474 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM21P19474 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
TRIM21P19474 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 TSSK5P-201ENST00000423978 907 ntBASIC16.91■□□□□ 0.3
TRIM21P19474 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM21P19474 FAM8A3P-201ENST00000427218 844 ntBASIC16.91■□□□□ 0.3
TRIM21P19474 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM21P19474 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM21P19474 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM21P19474 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM21P19474 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM21P19474 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM21P19474 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
TRIM21P19474 SPCS2P1-201ENST00000561636 679 ntBASIC16.91■□□□□ 0.3
TRIM21P19474 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM21P19474 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms