Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 FGD5P1-202ENST00000614866 2498 ntBASIC13.72□□□□□ -0.21
HLA-DOBP13765 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 AC026410.3-201ENST00000514280 936 ntBASIC13.72□□□□□ -0.21
HLA-DOBP13765 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 AC004233.3-201ENST00000607794 1269 ntBASIC13.72□□□□□ -0.21
HLA-DOBP13765 AC008761.3-201ENST00000624803 892 ntBASIC13.72□□□□□ -0.21
HLA-DOBP13765 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 AC013726.1-201ENST00000563747 2285 ntBASIC13.72□□□□□ -0.21
HLA-DOBP13765 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 AL161772.1-201ENST00000610494 4412 ntBASIC13.72□□□□□ -0.21
HLA-DOBP13765 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DOBP13765 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DOBP13765 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 AC007787.1-201ENST00000588095 1583 ntBASIC13.71□□□□□ -0.21
HLA-DOBP13765 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 AC002472.2-201ENST00000442739 958 ntBASIC13.71□□□□□ -0.21
HLA-DOBP13765 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 AC004066.1-201ENST00000502488 802 ntBASIC13.71□□□□□ -0.21
HLA-DOBP13765 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 RRP7BP-205ENST00000566851 833 ntBASIC13.71□□□□□ -0.21
HLA-DOBP13765 BRI3BPP1-201ENST00000594224 787 ntBASIC13.71□□□□□ -0.21
HLA-DOBP13765 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 AL138799.1-201ENST00000448213 1675 ntBASIC13.71□□□□□ -0.21
HLA-DOBP13765 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DOBP13765 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HLA-DOBP13765 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DOBP13765 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DOBP13765 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
HLA-DOBP13765 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DOBP13765 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms