Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CLTAP09496 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 AC004066.1-201ENST00000502488 802 ntBASIC16.75■□□□□ 0.27
CLTAP09496 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.75■□□□□ 0.27
CLTAP09496 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.75■□□□□ 0.27
CLTAP09496 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.75■□□□□ 0.27
CLTAP09496 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.75■□□□□ 0.27
CLTAP09496 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.75■□□□□ 0.27
CLTAP09496 BTNL10-201ENST00000595971 695 ntBASIC16.75■□□□□ 0.27
CLTAP09496 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.75■□□□□ 0.27
CLTAP09496 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 AL162274.1-201ENST00000617191 1098 ntBASIC16.75■□□□□ 0.27
CLTAP09496 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.75■□□□□ 0.27
CLTAP09496 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLTAP09496 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLTAP09496 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLTAP09496 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLTAP09496 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.74■□□□□ 0.27
CLTAP09496 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CLTAP09496 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.74■□□□□ 0.27
CLTAP09496 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.74■□□□□ 0.27
CLTAP09496 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CLTAP09496 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CLTAP09496 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.74■□□□□ 0.27
CLTAP09496 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.74■□□□□ 0.27
CLTAP09496 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLTAP09496 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CLTAP09496 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CLTAP09496 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CLTAP09496 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.74■□□□□ 0.27
CLTAP09496 USP32P1-208ENST00000506594 1164 ntBASIC16.74■□□□□ 0.27
CLTAP09496 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CLTAP09496 AC068587.3-201ENST00000526613 355 ntBASIC16.74■□□□□ 0.27
CLTAP09496 SLC25A47P1-201ENST00000531577 414 ntBASIC16.74■□□□□ 0.27
CLTAP09496 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.74■□□□□ 0.27
CLTAP09496 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.74■□□□□ 0.27
CLTAP09496 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLTAP09496 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.74■□□□□ 0.27
CLTAP09496 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLTAP09496 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.74■□□□□ 0.27
CLTAP09496 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.74■□□□□ 0.27
CLTAP09496 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.74■□□□□ 0.27
CLTAP09496 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 AC093525.8-201ENST00000624099 1342 ntBASIC16.73■□□□□ 0.27
CLTAP09496 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms