Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
THBS1P07996 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.1□□□□□ -0.15
THBS1P07996 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 AC093525.8-201ENST00000624099 1342 ntBASIC14.1□□□□□ -0.15
THBS1P07996 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
THBS1P07996 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.1□□□□□ -0.15
THBS1P07996 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.09□□□□□ -0.15
THBS1P07996 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 LINC00552-201ENST00000625151 2579 ntBASIC14.09□□□□□ -0.15
THBS1P07996 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
THBS1P07996 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.09□□□□□ -0.15
THBS1P07996 MEP1AP4-201ENST00000423244 1087 ntBASIC14.09□□□□□ -0.15
THBS1P07996 AL353779.1-201ENST00000434793 351 ntBASIC14.09□□□□□ -0.15
THBS1P07996 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
THBS1P07996 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.09□□□□□ -0.15
THBS1P07996 AL512638.1-201ENST00000457493 794 ntBASIC14.09□□□□□ -0.15
THBS1P07996 RPL13AP25-201ENST00000484130 612 ntBASIC14.09□□□□□ -0.15
THBS1P07996 AC026410.3-201ENST00000514280 936 ntBASIC14.09□□□□□ -0.15
THBS1P07996 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.09□□□□□ -0.15
THBS1P07996 AC104794.3-201ENST00000566840 1248 ntBASIC14.09□□□□□ -0.15
THBS1P07996 RRP7BP-205ENST00000566851 833 ntBASIC14.09□□□□□ -0.15
THBS1P07996 LINC02560-201ENST00000596379 459 ntBASIC14.09□□□□□ -0.15
THBS1P07996 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 AL359258.3-201ENST00000622910 2331 ntBASIC14.09□□□□□ -0.15
THBS1P07996 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
THBS1P07996 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
THBS1P07996 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
THBS1P07996 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.09□□□□□ -0.15
THBS1P07996 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
THBS1P07996 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
THBS1P07996 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
THBS1P07996 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.08□□□□□ -0.15
THBS1P07996 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.08□□□□□ -0.16
THBS1P07996 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.08□□□□□ -0.16
THBS1P07996 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
THBS1P07996 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
THBS1P07996 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
THBS1P07996 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.08□□□□□ -0.16
THBS1P07996 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
THBS1P07996 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 MRPS18AP1-201ENST00000414458 589 ntBASIC14.08□□□□□ -0.16
THBS1P07996 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.08□□□□□ -0.16
THBS1P07996 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.08□□□□□ -0.16
THBS1P07996 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.08□□□□□ -0.16
THBS1P07996 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
THBS1P07996 AC005225.4-201ENST00000557330 545 ntBASIC14.08□□□□□ -0.16
THBS1P07996 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.08□□□□□ -0.16
THBS1P07996 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
THBS1P07996 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
THBS1P07996 AC107373.2-201ENST00000607735 490 ntBASIC14.08□□□□□ -0.16
THBS1P07996 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
THBS1P07996 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
THBS1P07996 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms