Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP1A1P05023 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP1A1P05023 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP1A1P05023 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP1A1P05023 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1A1P05023 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP1A1P05023 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
ATP1A1P05023 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1A1P05023 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP1A1P05023 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP1A1P05023 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ATP1A1P05023 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1A1P05023 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ATP1A1P05023 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP1A1P05023 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP1A1P05023 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP1A1P05023 AC109322.1-201ENST00000524499 1264 ntBASIC16.31■□□□□ 0.2
ATP1A1P05023 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1A1P05023 AC004449.1-201ENST00000564240 433 ntBASIC16.31■□□□□ 0.2
ATP1A1P05023 RARRES2P9-201ENST00000565168 469 ntBASIC16.31■□□□□ 0.2
ATP1A1P05023 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP1A1P05023 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP1A1P05023 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1A1P05023 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1A1P05023 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 AL137784.3-201ENST00000623858 2288 ntBASIC16.31■□□□□ 0.2
ATP1A1P05023 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATP1A1P05023 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ATP1A1P05023 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 MBLAC2-202ENST00000514906 1936 ntBASIC16.31■□□□□ 0.2
ATP1A1P05023 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1A1P05023 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1A1P05023 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1A1P05023 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP1A1P05023 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP1A1P05023 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ATP1A1P05023 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP1A1P05023 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 AC074338.1-201ENST00000416825 156 ntBASIC16.3■□□□□ 0.2
ATP1A1P05023 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP1A1P05023 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP1A1P05023 RBPMS2P1-201ENST00000437762 623 ntBASIC16.3■□□□□ 0.2
ATP1A1P05023 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP1A1P05023 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP1A1P05023 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.3■□□□□ 0.2
ATP1A1P05023 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP1A1P05023 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP1A1P05023 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP1A1P05023 LINC00628-201ENST00000628516 1289 ntBASIC16.3■□□□□ 0.2
ATP1A1P05023 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATP1A1P05023 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATP1A1P05023 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ATP1A1P05023 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP1A1P05023 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1A1P05023 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP1A1P05023 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ATP1A1P05023 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP1A1P05023 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1A1P05023 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms