Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CD3DP04234 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD3DP04234 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CD3DP04234 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.01□□□□□ -0.33
CD3DP04234 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.01□□□□□ -0.33
CD3DP04234 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.01□□□□□ -0.33
CD3DP04234 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD3DP04234 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
CD3DP04234 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CD3DP04234 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD3DP04234 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CD3DP04234 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD3DP04234 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD3DP04234 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD3DP04234 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD3DP04234 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD3DP04234 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CD3DP04234 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD3DP04234 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CD3DP04234 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 DGCR9-201ENST00000609630 2415 ntBASIC13□□□□□ -0.33
CD3DP04234 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13□□□□□ -0.33
CD3DP04234 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CD3DP04234 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13□□□□□ -0.33
CD3DP04234 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD3DP04234 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CD3DP04234 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CD3DP04234 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13□□□□□ -0.33
CD3DP04234 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 TPT1P11-201ENST00000458482 498 ntBASIC13□□□□□ -0.33
CD3DP04234 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CD3DP04234 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13□□□□□ -0.33
CD3DP04234 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13□□□□□ -0.33
CD3DP04234 AC068137.2-201ENST00000605408 478 ntBASIC13□□□□□ -0.33
CD3DP04234 AC008267.7-201ENST00000624570 1194 ntBASIC13□□□□□ -0.33
CD3DP04234 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13□□□□□ -0.33
CD3DP04234 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD3DP04234 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CD3DP04234 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
CD3DP04234 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
CD3DP04234 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CD3DP04234 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13□□□□□ -0.33
CD3DP04234 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD3DP04234 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13□□□□□ -0.33
CD3DP04234 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
CD3DP04234 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CD3DP04234 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13□□□□□ -0.33
CD3DP04234 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD3DP04234 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD3DP04234 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13□□□□□ -0.33
CD3DP04234 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD3DP04234 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD3DP04234 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CD3DP04234 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.99□□□□□ -0.33
CD3DP04234 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD3DP04234 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD3DP04234 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD3DP04234 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD3DP04234 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD3DP04234 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD3DP04234 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.99□□□□□ -0.33
CD3DP04234 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
CD3DP04234 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD3DP04234 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD3DP04234 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.99□□□□□ -0.33
CD3DP04234 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms