Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.41■□□□□ 0.06
GPC4O75487 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GPC4O75487 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
GPC4O75487 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.4■□□□□ 0.06
GPC4O75487 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
GPC4O75487 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
GPC4O75487 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 KRT8P44-201ENST00000441609 1350 ntBASIC15.4■□□□□ 0.06
GPC4O75487 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.4■□□□□ 0.06
GPC4O75487 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.4■□□□□ 0.06
GPC4O75487 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.4■□□□□ 0.06
GPC4O75487 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
GPC4O75487 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.4■□□□□ 0.06
GPC4O75487 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.4■□□□□ 0.06
GPC4O75487 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.4■□□□□ 0.06
GPC4O75487 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
GPC4O75487 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.4■□□□□ 0.06
GPC4O75487 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
GPC4O75487 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.4■□□□□ 0.06
GPC4O75487 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.4■□□□□ 0.06
GPC4O75487 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.4■□□□□ 0.06
GPC4O75487 INGX-202ENST00000489074 768 ntBASIC15.4■□□□□ 0.06
GPC4O75487 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.4■□□□□ 0.06
GPC4O75487 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.4■□□□□ 0.06
GPC4O75487 AC135586.1-201ENST00000539323 574 ntBASIC15.4■□□□□ 0.06
GPC4O75487 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.4■□□□□ 0.06
GPC4O75487 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.4■□□□□ 0.06
GPC4O75487 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.4■□□□□ 0.06
GPC4O75487 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.4■□□□□ 0.06
GPC4O75487 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.4■□□□□ 0.06
GPC4O75487 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
GPC4O75487 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
GPC4O75487 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
GPC4O75487 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GPC4O75487 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.4■□□□□ 0.06
GPC4O75487 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
GPC4O75487 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.4■□□□□ 0.06
GPC4O75487 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
GPC4O75487 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
GPC4O75487 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.39■□□□□ 0.05
GPC4O75487 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.39■□□□□ 0.05
GPC4O75487 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
GPC4O75487 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
GPC4O75487 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
GPC4O75487 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
GPC4O75487 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
GPC4O75487 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.39■□□□□ 0.05
GPC4O75487 UGT1A2P-201ENST00000454886 866 ntBASIC15.39■□□□□ 0.05
GPC4O75487 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.39■□□□□ 0.05
GPC4O75487 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.39■□□□□ 0.05
GPC4O75487 SPDYE18-201ENST00000510091 1050 ntBASIC15.39■□□□□ 0.05
GPC4O75487 SRD5A3P1-201ENST00000603021 949 ntBASIC15.39■□□□□ 0.05
GPC4O75487 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.39■□□□□ 0.05
GPC4O75487 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.39■□□□□ 0.05
GPC4O75487 AC148477.4-201ENST00000613430 1793 ntBASIC15.39■□□□□ 0.05
GPC4O75487 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
GPC4O75487 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.39■□□□□ 0.05
GPC4O75487 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.39■□□□□ 0.05
GPC4O75487 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.39■□□□□ 0.05
GPC4O75487 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GPC4O75487 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.38■□□□□ 0.05
GPC4O75487 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 AC013726.1-201ENST00000563747 2285 ntBASIC15.38■□□□□ 0.05
GPC4O75487 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
GPC4O75487 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.38■□□□□ 0.05
GPC4O75487 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.38■□□□□ 0.05
GPC4O75487 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms