Protein–RNA interactions for Protein: O43526

KCNQ2, Potassium voltage-gated channel subfamily KQT member 2, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2O43526 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
KCNQ2O43526 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
KCNQ2O43526 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 AC090502.4-201ENST00000551714 1386 ntBASIC19.25■□□□□ 0.67
KCNQ2O43526 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
KCNQ2O43526 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC19.25■□□□□ 0.67
KCNQ2O43526 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC19.25■□□□□ 0.67
KCNQ2O43526 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.25■□□□□ 0.67
KCNQ2O43526 AC087392.5-201ENST00000612517 489 ntBASIC19.25■□□□□ 0.67
KCNQ2O43526 AC027601.3-201ENST00000622907 509 ntBASIC19.25■□□□□ 0.67
KCNQ2O43526 AC233280.19-201ENST00000633223 136 ntBASIC19.25■□□□□ 0.67
KCNQ2O43526 AP001184.1-201ENST00000637936 376 ntBASIC19.25■□□□□ 0.67
KCNQ2O43526 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ2O43526 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.25■□□□□ 0.67
KCNQ2O43526 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
KCNQ2O43526 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
KCNQ2O43526 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC19.25■□□□□ 0.67
KCNQ2O43526 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNQ2O43526 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.24■□□□□ 0.67
KCNQ2O43526 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC19.24■□□□□ 0.67
KCNQ2O43526 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNQ2O43526 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC19.24■□□□□ 0.67
KCNQ2O43526 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
KCNQ2O43526 BRI3P1-201ENST00000440440 378 ntBASIC19.24■□□□□ 0.67
KCNQ2O43526 DUTP3-201ENST00000450025 415 ntBASIC19.24■□□□□ 0.67
KCNQ2O43526 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC19.24■□□□□ 0.67
KCNQ2O43526 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 AC027139.1-201ENST00000565286 951 ntBASIC19.24■□□□□ 0.67
KCNQ2O43526 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.24■□□□□ 0.67
KCNQ2O43526 AC007326.1-201ENST00000604539 458 ntBASIC19.24■□□□□ 0.67
KCNQ2O43526 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
KCNQ2O43526 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
KCNQ2O43526 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
KCNQ2O43526 KRT18P9-201ENST00000604826 1300 ntBASIC19.24■□□□□ 0.67
KCNQ2O43526 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNQ2O43526 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ2O43526 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
KCNQ2O43526 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNQ2O43526 AC003102.2-201ENST00000589195 1469 ntBASIC19.23■□□□□ 0.67
KCNQ2O43526 AC010491.1-201ENST00000563101 2797 ntBASIC19.23■□□□□ 0.67
KCNQ2O43526 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNQ2O43526 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
KCNQ2O43526 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC19.23■□□□□ 0.67
KCNQ2O43526 AC004837.1-201ENST00000446267 564 ntBASIC19.23■□□□□ 0.67
KCNQ2O43526 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
KCNQ2O43526 AC073592.2-201ENST00000623062 780 ntBASIC19.23■□□□□ 0.67
KCNQ2O43526 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNQ2O43526 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
KCNQ2O43526 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNQ2O43526 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ2O43526 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNQ2O43526 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ2O43526 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ2O43526 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ2O43526 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ2O43526 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ2O43526 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ2O43526 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ2O43526 AD000864.1-201ENST00000624076 2295 ntBASIC19.22■□□□□ 0.67
KCNQ2O43526 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ2O43526 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ2O43526 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ2O43526 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KCNQ2O43526 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ2O43526 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms