Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
DDX39AO00148 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.16■□□□□ 0.34
DDX39AO00148 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX39AO00148 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 KRT8P44-201ENST00000441609 1350 ntBASIC17.15■□□□□ 0.34
DDX39AO00148 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
DDX39AO00148 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.15■□□□□ 0.34
DDX39AO00148 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.15■□□□□ 0.34
DDX39AO00148 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
DDX39AO00148 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
DDX39AO00148 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
DDX39AO00148 AC104457.1-201ENST00000401024 814 ntBASIC17.15■□□□□ 0.34
DDX39AO00148 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
DDX39AO00148 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.15■□□□□ 0.34
DDX39AO00148 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.15■□□□□ 0.34
DDX39AO00148 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.15■□□□□ 0.34
DDX39AO00148 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.15■□□□□ 0.34
DDX39AO00148 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 AL033527.4-201ENST00000641026 673 ntBASIC17.15■□□□□ 0.34
DDX39AO00148 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.15■□□□□ 0.34
DDX39AO00148 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 AC055811.4-201ENST00000624039 1754 ntBASIC17.15■□□□□ 0.34
DDX39AO00148 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
DDX39AO00148 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
DDX39AO00148 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX39AO00148 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.14■□□□□ 0.34
DDX39AO00148 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
DDX39AO00148 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.14■□□□□ 0.34
DDX39AO00148 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.14■□□□□ 0.34
DDX39AO00148 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX39AO00148 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
DDX39AO00148 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX39AO00148 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX39AO00148 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX39AO00148 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.14■□□□□ 0.33
DDX39AO00148 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
DDX39AO00148 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.14■□□□□ 0.33
DDX39AO00148 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.14■□□□□ 0.33
DDX39AO00148 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.14■□□□□ 0.33
DDX39AO00148 CNN2P8-201ENST00000421872 913 ntBASIC17.14■□□□□ 0.33
DDX39AO00148 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.14■□□□□ 0.33
DDX39AO00148 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.14■□□□□ 0.33
DDX39AO00148 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX39AO00148 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.14■□□□□ 0.33
DDX39AO00148 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX39AO00148 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
DDX39AO00148 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX39AO00148 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.14■□□□□ 0.33
DDX39AO00148 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.14■□□□□ 0.33
DDX39AO00148 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.14■□□□□ 0.33
DDX39AO00148 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX39AO00148 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX39AO00148 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms