Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 FAM86LP-201ENST00000478302 853 ntBASIC14.08□□□□□ -0.16
CDHR4A6H8M9 AC093214.1-201ENST00000511688 1107 ntBASIC14.08□□□□□ -0.16
CDHR4A6H8M9 DOC2GP-202ENST00000514950 1163 ntBASIC14.08□□□□□ -0.16
CDHR4A6H8M9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 AL360270.3-201ENST00000609118 1348 ntBASIC14.08□□□□□ -0.16
CDHR4A6H8M9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 LINC00552-201ENST00000625151 2579 ntBASIC14.08□□□□□ -0.16
CDHR4A6H8M9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDHR4A6H8M9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 DRD5P1-201ENST00000456605 1438 ntBASIC14.07□□□□□ -0.16
CDHR4A6H8M9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 AC092183.1-201ENST00000469884 875 ntBASIC14.07□□□□□ -0.16
CDHR4A6H8M9 RN7SL399P-201ENST00000471648 279 ntBASIC14.07□□□□□ -0.16
CDHR4A6H8M9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 TPRX2P-201ENST00000535362 881 ntBASIC14.07□□□□□ -0.16
CDHR4A6H8M9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 AC023310.3-201ENST00000557027 670 ntBASIC14.07□□□□□ -0.16
CDHR4A6H8M9 AC100756.1-201ENST00000562736 682 ntBASIC14.07□□□□□ -0.16
CDHR4A6H8M9 AC138749.3-201ENST00000567691 622 ntBASIC14.07□□□□□ -0.16
CDHR4A6H8M9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 AC116165.1-201ENST00000611806 668 ntBASIC14.07□□□□□ -0.16
CDHR4A6H8M9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 LILRP1-201ENST00000444199 1370 ntBASIC14.07□□□□□ -0.16
CDHR4A6H8M9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDHR4A6H8M9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.06□□□□□ -0.16
CDHR4A6H8M9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDHR4A6H8M9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms