Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 RPL5P21-201ENST00000404620 815 ntBASIC13.97□□□□□ -0.17
DKK4Q9UBT3 TSPY25P-201ENST00000429463 745 ntBASIC13.97□□□□□ -0.17
DKK4Q9UBT3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 AC084752.1-201ENST00000509766 622 ntBASIC13.97□□□□□ -0.17
DKK4Q9UBT3 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 HKR1-225ENST00000592168 566 ntTSL 4 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 AC002472.4-201ENST00000641915 272 ntBASIC13.97□□□□□ -0.17
DKK4Q9UBT3 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DKK4Q9UBT3 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 MRPL22P1-201ENST00000505398 616 ntBASIC13.96□□□□□ -0.17
DKK4Q9UBT3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 PLS3-210ENST00000626746 216 ntTSL 4 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.96□□□□□ -0.17
DKK4Q9UBT3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
DKK4Q9UBT3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DKK4Q9UBT3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DKK4Q9UBT3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
DKK4Q9UBT3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DKK4Q9UBT3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
DKK4Q9UBT3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
DKK4Q9UBT3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 AC011840.2-201ENST00000563063 1520 ntBASIC13.95□□□□□ -0.18
DKK4Q9UBT3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 LINC01165-201ENST00000445190 1623 ntBASIC13.95□□□□□ -0.18
DKK4Q9UBT3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 AC018695.7-201ENST00000624587 2492 ntBASIC13.95□□□□□ -0.18
DKK4Q9UBT3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DKK4Q9UBT3 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms