Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 AC136759.1-202ENST00000530858 2194 ntBASIC18.84■□□□□ 0.61
UPF2Q9HAU5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 RARRES2P9-201ENST00000565168 469 ntBASIC18.84■□□□□ 0.61
UPF2Q9HAU5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 AC092865.6-201ENST00000642101 219 ntBASIC18.84■□□□□ 0.61
UPF2Q9HAU5 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 PPP1R26P4-201ENST00000619065 3527 ntBASIC18.84■□□□□ 0.61
UPF2Q9HAU5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF2Q9HAU5 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 AC018442.1-201ENST00000421439 2061 ntBASIC18.83■□□□□ 0.61
UPF2Q9HAU5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF2Q9HAU5 BEND3P1-201ENST00000421591 1944 ntBASIC18.83■□□□□ 0.6
UPF2Q9HAU5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 FAM58CP-201ENST00000435741 640 ntBASIC18.83■□□□□ 0.6
UPF2Q9HAU5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 AC079140.1-201ENST00000508039 487 ntBASIC18.83■□□□□ 0.6
UPF2Q9HAU5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 SLC25A6P4-201ENST00000586535 553 ntBASIC18.83■□□□□ 0.6
UPF2Q9HAU5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF2Q9HAU5 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms