Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 AP006288.1-201ENST00000446065 395 ntBASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 AC069262.1-201ENST00000539058 672 ntBASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
POLR2J3Q9H1A7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 AC138969.3-201ENST00000546612 1459 ntBASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 AC138932.2-201ENST00000548268 1459 ntBASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 AC126755.4-201ENST00000549796 1459 ntBASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.19□□□□□ -0.14
POLR2J3Q9H1A7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms