Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 TIMM17BP1-201ENST00000545713 516 ntBASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPF3BQ9BZI7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 GAPDHP21-201ENST00000450301 1010 ntBASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 AL390955.2-201ENST00000603032 514 ntBASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 AL157414.3-201ENST00000624276 1954 ntBASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPF3BQ9BZI7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 PCDHA3-202ENST00000532566 4594 ntBASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 BASP1P1-201ENST00000430708 665 ntBASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 AL391069.4-201ENST00000609583 481 ntBASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 AL645728.2-202ENST00000641679 227 ntBASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 AC097359.2-201ENST00000604992 2389 ntBASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
UPF3BQ9BZI7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UPF3BQ9BZI7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPF3BQ9BZI7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPF3BQ9BZI7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
UPF3BQ9BZI7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.27■□□□□ 0.51
UPF3BQ9BZI7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
UPF3BQ9BZI7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms