Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 AC009477.1-201ENST00000452936 217 ntBASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 UGT1A2P-201ENST00000454886 866 ntBASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 AC135586.1-201ENST00000539323 574 ntBASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
YIPF4Q9BSR8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 AC138969.3-201ENST00000546612 1459 ntBASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 AC138932.2-201ENST00000548268 1459 ntBASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 AC126755.4-201ENST00000549796 1459 ntBASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 AC114501.2-201ENST00000439631 535 ntBASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 AC004840.1-201ENST00000636359 365 ntBASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
YIPF4Q9BSR8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
YIPF4Q9BSR8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms