Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 AL359881.3-201ENST00000602640 1721 ntBASIC14.93□□□□□ -0.02
EBF4Q9BQW3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 AC106730.1-201ENST00000566722 1090 ntBASIC14.93□□□□□ -0.02
EBF4Q9BQW3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 AC055811.4-201ENST00000624039 1754 ntBASIC14.93□□□□□ -0.02
EBF4Q9BQW3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.92□□□□□ -0.02
EBF4Q9BQW3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 LILRP1-201ENST00000444199 1370 ntBASIC14.92□□□□□ -0.02
EBF4Q9BQW3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 AC097376.2-205ENST00000610159 5334 ntBASIC14.92□□□□□ -0.02
EBF4Q9BQW3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 AC023090.2-201ENST00000625182 2110 ntBASIC14.92□□□□□ -0.02
EBF4Q9BQW3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.92□□□□□ -0.02
EBF4Q9BQW3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms