Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.39■□□□□ 0.53
EYA3Q99504 AC125604.1-201ENST00000496255 707 ntBASIC18.39■□□□□ 0.53
EYA3Q99504 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.39■□□□□ 0.53
EYA3Q99504 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.39■□□□□ 0.53
EYA3Q99504 DUX4L46-201ENST00000566845 751 ntBASIC18.39■□□□□ 0.53
EYA3Q99504 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.39■□□□□ 0.53
EYA3Q99504 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
EYA3Q99504 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
EYA3Q99504 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
EYA3Q99504 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
EYA3Q99504 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.39■□□□□ 0.53
EYA3Q99504 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
EYA3Q99504 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.38■□□□□ 0.53
EYA3Q99504 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
EYA3Q99504 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
EYA3Q99504 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
EYA3Q99504 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.38■□□□□ 0.53
EYA3Q99504 AL596276.2-201ENST00000447525 331 ntBASIC18.38■□□□□ 0.53
EYA3Q99504 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
EYA3Q99504 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.38■□□□□ 0.53
EYA3Q99504 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
EYA3Q99504 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.38■□□□□ 0.53
EYA3Q99504 MIR4783-201ENST00000580343 82 ntBASIC18.38■□□□□ 0.53
EYA3Q99504 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.38■□□□□ 0.53
EYA3Q99504 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.38■□□□□ 0.53
EYA3Q99504 AC138696.2-201ENST00000607376 223 ntBASIC18.38■□□□□ 0.53
EYA3Q99504 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.38■□□□□ 0.53
EYA3Q99504 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 AL157414.3-201ENST00000624276 1954 ntBASIC18.38■□□□□ 0.53
EYA3Q99504 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.38■□□□□ 0.53
EYA3Q99504 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
EYA3Q99504 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.38■□□□□ 0.53
EYA3Q99504 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
EYA3Q99504 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EYA3Q99504 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.37■□□□□ 0.53
EYA3Q99504 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 AC010141.1-201ENST00000411585 623 ntBASIC18.37■□□□□ 0.53
EYA3Q99504 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.37■□□□□ 0.53
EYA3Q99504 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.37■□□□□ 0.53
EYA3Q99504 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
EYA3Q99504 PRKXP1-201ENST00000561423 1122 ntBASIC18.37■□□□□ 0.53
EYA3Q99504 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 AL133499.1-201ENST00000596207 608 ntBASIC18.37■□□□□ 0.53
EYA3Q99504 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.37■□□□□ 0.53
EYA3Q99504 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EYA3Q99504 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
EYA3Q99504 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 PRAL-201ENST00000624952 3286 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms