Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 AJ011931.1-201ENST00000618749 2492 ntBASIC12.29□□□□□ -0.44
RNF2Q99496 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF2Q99496 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RNF2Q99496 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF2Q99496 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF2Q99496 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF2Q99496 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RNF2Q99496 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
RNF2Q99496 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF2Q99496 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RNF2Q99496 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 AP3S2-216ENST00000617003 1561 ntBASIC12.28□□□□□ -0.44
RNF2Q99496 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.28□□□□□ -0.44
RNF2Q99496 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF2Q99496 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF2Q99496 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 AC254562.1-201ENST00000417586 456 ntBASIC12.28□□□□□ -0.44
RNF2Q99496 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF2Q99496 RPS8P6-201ENST00000426177 609 ntBASIC12.28□□□□□ -0.44
RNF2Q99496 FAM58DP-201ENST00000428076 619 ntBASIC12.28□□□□□ -0.44
RNF2Q99496 CNN2P11-201ENST00000429351 262 ntBASIC12.28□□□□□ -0.44
RNF2Q99496 AP006288.1-201ENST00000446065 395 ntBASIC12.28□□□□□ -0.44
RNF2Q99496 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF2Q99496 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RNF2Q99496 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 AC093520.2-201ENST00000561830 333 ntBASIC12.28□□□□□ -0.44
RNF2Q99496 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF2Q99496 AC061975.2-201ENST00000581722 295 ntBASIC12.28□□□□□ -0.44
RNF2Q99496 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.28□□□□□ -0.44
RNF2Q99496 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RNF2Q99496 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RNF2Q99496 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF2Q99496 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.28□□□□□ -0.44
RNF2Q99496 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RNF2Q99496 LINC00552-201ENST00000625151 2579 ntBASIC12.28□□□□□ -0.44
RNF2Q99496 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RNF2Q99496 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF2Q99496 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RNF2Q99496 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF2Q99496 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
RNF2Q99496 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
RNF2Q99496 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF2Q99496 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF2Q99496 DMBT1P1-203ENST00000636837 4628 ntBASIC12.28□□□□□ -0.44
RNF2Q99496 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF2Q99496 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF2Q99496 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.27□□□□□ -0.44
RNF2Q99496 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF2Q99496 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF2Q99496 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.44
RNF2Q99496 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
RNF2Q99496 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.27□□□□□ -0.44
RNF2Q99496 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.27□□□□□ -0.44
RNF2Q99496 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.44
RNF2Q99496 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.27□□□□□ -0.44
RNF2Q99496 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF2Q99496 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF2Q99496 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
RNF2Q99496 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.27□□□□□ -0.44
RNF2Q99496 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF2Q99496 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF2Q99496 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RNF2Q99496 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.27□□□□□ -0.44
RNF2Q99496 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF2Q99496 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RNF2Q99496 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms