Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 DMBT1P1-203ENST00000636837 4628 ntBASIC14.46□□□□□ -0.09
NR1H4Q96RI1 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 AC131212.3-201ENST00000624087 4219 ntBASIC14.46□□□□□ -0.09
NR1H4Q96RI1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 KRT18P35-201ENST00000510488 1269 ntBASIC14.46□□□□□ -0.09
NR1H4Q96RI1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 AC107918.2-201ENST00000530817 355 ntBASIC14.46□□□□□ -0.09
NR1H4Q96RI1 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 NPAP1P7-201ENST00000613027 823 ntBASIC14.46□□□□□ -0.09
NR1H4Q96RI1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NR1H4Q96RI1 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.46□□□□□ -0.1
NR1H4Q96RI1 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
NR1H4Q96RI1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NR1H4Q96RI1 AC023794.5-201ENST00000564380 2157 ntBASIC14.46□□□□□ -0.1
NR1H4Q96RI1 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NR1H4Q96RI1 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NR1H4Q96RI1 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 AL118506.1-201ENST00000601296 3082 ntBASIC14.45□□□□□ -0.1
NR1H4Q96RI1 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 AP000845.1-201ENST00000581677 2131 ntBASIC14.45□□□□□ -0.1
NR1H4Q96RI1 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NR1H4Q96RI1 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms