Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL21A1Q96P44 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL21A1Q96P44 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
COL21A1Q96P44 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.52□□□□□ -0.08
COL21A1Q96P44 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
COL21A1Q96P44 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
COL21A1Q96P44 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.52□□□□□ -0.08
COL21A1Q96P44 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.52□□□□□ -0.08
COL21A1Q96P44 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 FGD5P1-202ENST00000614866 2498 ntBASIC14.52□□□□□ -0.08
COL21A1Q96P44 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.52□□□□□ -0.08
COL21A1Q96P44 AC005912.2-201ENST00000619492 2400 ntBASIC14.52□□□□□ -0.08
COL21A1Q96P44 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.52□□□□□ -0.08
COL21A1Q96P44 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL21A1Q96P44 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
COL21A1Q96P44 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.52□□□□□ -0.09
COL21A1Q96P44 HMGN1P19-201ENST00000436976 333 ntBASIC14.52□□□□□ -0.09
COL21A1Q96P44 RPL13P2-201ENST00000440687 659 ntBASIC14.52□□□□□ -0.09
COL21A1Q96P44 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.52□□□□□ -0.09
COL21A1Q96P44 TSPY16P-201ENST00000449843 468 ntBASIC14.52□□□□□ -0.09
COL21A1Q96P44 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.52□□□□□ -0.09
COL21A1Q96P44 LINC01115-203ENST00000606068 577 ntBASIC14.52□□□□□ -0.09
COL21A1Q96P44 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 CICP11-201ENST00000434745 2827 ntBASIC14.52□□□□□ -0.09
COL21A1Q96P44 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.52□□□□□ -0.09
COL21A1Q96P44 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.52□□□□□ -0.09
COL21A1Q96P44 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
COL21A1Q96P44 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
COL21A1Q96P44 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL21A1Q96P44 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 AC015922.1-201ENST00000421102 1152 ntBASIC14.51□□□□□ -0.09
COL21A1Q96P44 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 AC009118.2-201ENST00000613275 655 ntBASIC14.51□□□□□ -0.09
COL21A1Q96P44 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL21A1Q96P44 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
COL21A1Q96P44 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms