Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 DGCR5-201ENST00000399539 862 ntBASIC15.84■□□□□ 0.13
IFT43Q96FT9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT43Q96FT9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
IFT43Q96FT9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
IFT43Q96FT9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IFT43Q96FT9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.83■□□□□ 0.13
IFT43Q96FT9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IFT43Q96FT9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.13
IFT43Q96FT9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 TPRX2P-201ENST00000535362 881 ntBASIC15.83■□□□□ 0.12
IFT43Q96FT9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 AL365209.1-201ENST00000624418 6473 ntBASIC15.83■□□□□ 0.12
IFT43Q96FT9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.83■□□□□ 0.12
IFT43Q96FT9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFT43Q96FT9 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IFT43Q96FT9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 RN7SL752P-201ENST00000463779 287 ntBASIC15.82■□□□□ 0.12
IFT43Q96FT9 SPDYE18-201ENST00000510091 1050 ntBASIC15.82■□□□□ 0.12
IFT43Q96FT9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
IFT43Q96FT9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms