Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 AC119751.2-201ENST00000504529 210 ntBASIC14.5□□□□□ -0.09
TM9SF4Q92544 AC068587.3-201ENST00000526613 355 ntBASIC14.5□□□□□ -0.09
TM9SF4Q92544 FAM8A2P-201ENST00000528813 1142 ntBASIC14.5□□□□□ -0.09
TM9SF4Q92544 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 MIR4525-201ENST00000580000 75 ntBASIC14.5□□□□□ -0.09
TM9SF4Q92544 RN7SL219P-201ENST00000582872 296 ntBASIC14.5□□□□□ -0.09
TM9SF4Q92544 MIR4259-201ENST00000584466 101 ntBASIC14.5□□□□□ -0.09
TM9SF4Q92544 AL450472.2-201ENST00000603663 1156 ntBASIC14.5□□□□□ -0.09
TM9SF4Q92544 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TM9SF4Q92544 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TM9SF4Q92544 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TM9SF4Q92544 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TM9SF4Q92544 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TM9SF4Q92544 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TM9SF4Q92544 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TM9SF4Q92544 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TM9SF4Q92544 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 FO681548.1-201ENST00000455617 1132 ntBASIC14.49□□□□□ -0.09
TM9SF4Q92544 PHKG1P2-201ENST00000457537 863 ntBASIC14.49□□□□□ -0.09
TM9SF4Q92544 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 SNX29P1-201ENST00000548357 1007 ntBASIC14.49□□□□□ -0.09
TM9SF4Q92544 AC079316.1-201ENST00000548397 411 ntBASIC14.49□□□□□ -0.09
TM9SF4Q92544 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 PDIA3P1-201ENST00000471856 1510 ntBASIC14.49□□□□□ -0.09
TM9SF4Q92544 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 AC091951.1-201ENST00000512854 2465 ntBASIC14.49□□□□□ -0.09
TM9SF4Q92544 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TM9SF4Q92544 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TM9SF4Q92544 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 BRWD1P1-201ENST00000401091 371 ntBASIC14.48□□□□□ -0.09
TM9SF4Q92544 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms