Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 NUTM2HP-201ENST00000442076 2498 ntBASIC11.48□□□□□ -0.57
NUP35Q8NFH5 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 MIR1199-201ENST00000621445 119 ntBASIC11.48□□□□□ -0.57
NUP35Q8NFH5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 AC015818.8-201ENST00000587907 1519 ntBASIC11.48□□□□□ -0.57
NUP35Q8NFH5 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 AL607033.1-201ENST00000623900 1599 ntBASIC11.48□□□□□ -0.57
NUP35Q8NFH5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 AC131212.3-201ENST00000624087 4219 ntBASIC11.48□□□□□ -0.57
NUP35Q8NFH5 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.48□□□□□ -0.57
NUP35Q8NFH5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AC016397.2-201ENST00000624848 1985 ntBASIC11.47□□□□□ -0.57
NUP35Q8NFH5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AL591122.2-201ENST00000624125 1853 ntBASIC11.47□□□□□ -0.57
NUP35Q8NFH5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AC012508.2-201ENST00000567613 1472 ntBASIC11.47□□□□□ -0.57
NUP35Q8NFH5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AC098859.1-201ENST00000502915 1238 ntBASIC11.47□□□□□ -0.57
NUP35Q8NFH5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms