Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 TNRC18P2-201ENST00000417666 2714 ntBASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 AP002414.2-201ENST00000591780 3365 ntBASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 SPDYE19P-201ENST00000338590 713 ntBASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 RN7SL399P-201ENST00000471648 279 ntBASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 FAM86LP-201ENST00000478302 853 ntBASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 RPL13AP25-201ENST00000484130 612 ntBASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 AC004066.1-201ENST00000502488 802 ntBASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 GAPDHP40-201ENST00000505218 1006 ntBASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 SAMD11P1-201ENST00000571429 661 ntBASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 AC009118.2-201ENST00000613275 655 ntBASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TTC9CQ8N5M4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TTC9CQ8N5M4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TTC9CQ8N5M4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TTC9CQ8N5M4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TTC9CQ8N5M4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TTC9CQ8N5M4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
TTC9CQ8N5M4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TTC9CQ8N5M4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TTC9CQ8N5M4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms