Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLX4Q8IY92 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLX4Q8IY92 ALG1L6P-201ENST00000515248 758 ntBASIC18.12■□□□□ 0.49
SLX4Q8IY92 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 AC093752.3-201ENST00000567343 901 ntBASIC18.12■□□□□ 0.49
SLX4Q8IY92 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLX4Q8IY92 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLX4Q8IY92 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLX4Q8IY92 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLX4Q8IY92 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLX4Q8IY92 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLX4Q8IY92 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLX4Q8IY92 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLX4Q8IY92 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLX4Q8IY92 AC114947.1-202ENST00000514136 344 ntBASIC18.12■□□□□ 0.49
SLX4Q8IY92 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 NUDT4P2-201ENST00000578341 546 ntBASIC18.12■□□□□ 0.49
SLX4Q8IY92 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.12■□□□□ 0.49
SLX4Q8IY92 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLX4Q8IY92 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLX4Q8IY92 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLX4Q8IY92 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLX4Q8IY92 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLX4Q8IY92 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLX4Q8IY92 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 AL590440.2-201ENST00000641973 1595 ntBASIC18.11■□□□□ 0.49
SLX4Q8IY92 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLX4Q8IY92 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLX4Q8IY92 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLX4Q8IY92 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 AC007292.2-201ENST00000593524 1812 ntBASIC18.11■□□□□ 0.49
SLX4Q8IY92 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLX4Q8IY92 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLX4Q8IY92 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.11■□□□□ 0.49
SLX4Q8IY92 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 AL592076.1-201ENST00000424448 303 ntBASIC18.1■□□□□ 0.49
SLX4Q8IY92 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 ALG1L13P-202ENST00000519320 584 ntBASIC18.1■□□□□ 0.49
SLX4Q8IY92 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 AC007326.1-201ENST00000604539 458 ntBASIC18.1■□□□□ 0.49
SLX4Q8IY92 AC009560.1-201ENST00000620208 434 ntBASIC18.1■□□□□ 0.49
SLX4Q8IY92 AC138466.4-201ENST00000623965 852 ntBASIC18.1■□□□□ 0.49
SLX4Q8IY92 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLX4Q8IY92 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.1■□□□□ 0.49
SLX4Q8IY92 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms