Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
APLFQ8IW19 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.29■□□□□ 0.04
APLFQ8IW19 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
APLFQ8IW19 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.29■□□□□ 0.04
APLFQ8IW19 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.29■□□□□ 0.04
APLFQ8IW19 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 POU5F1P6-201ENST00000466990 990 ntBASIC15.29■□□□□ 0.04
APLFQ8IW19 AC098859.1-201ENST00000502915 1238 ntBASIC15.29■□□□□ 0.04
APLFQ8IW19 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 AC009407.1-201ENST00000568958 598 ntBASIC15.29■□□□□ 0.04
APLFQ8IW19 TP53TG3HP-202ENST00000569755 579 ntBASIC15.29■□□□□ 0.04
APLFQ8IW19 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
APLFQ8IW19 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.29■□□□□ 0.04
APLFQ8IW19 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
APLFQ8IW19 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
APLFQ8IW19 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
APLFQ8IW19 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.29■□□□□ 0.04
APLFQ8IW19 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.28■□□□□ 0.04
APLFQ8IW19 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.28■□□□□ 0.04
APLFQ8IW19 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
APLFQ8IW19 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
APLFQ8IW19 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
APLFQ8IW19 AL031731.1-201ENST00000642131 2094 ntBASIC15.28■□□□□ 0.04
APLFQ8IW19 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.28■□□□□ 0.04
APLFQ8IW19 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
APLFQ8IW19 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
APLFQ8IW19 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.28■□□□□ 0.04
APLFQ8IW19 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 AL353779.1-201ENST00000434793 351 ntBASIC15.28■□□□□ 0.04
APLFQ8IW19 KRT17P7-201ENST00000451704 1104 ntBASIC15.28■□□□□ 0.04
APLFQ8IW19 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.28■□□□□ 0.04
APLFQ8IW19 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.28■□□□□ 0.04
APLFQ8IW19 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.28■□□□□ 0.04
APLFQ8IW19 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.28■□□□□ 0.04
APLFQ8IW19 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.28■□□□□ 0.04
APLFQ8IW19 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.28■□□□□ 0.04
APLFQ8IW19 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.28■□□□□ 0.04
APLFQ8IW19 RN7SL828P-201ENST00000607615 303 ntBASIC15.28■□□□□ 0.04
APLFQ8IW19 AL589739.1-201ENST00000607720 493 ntBASIC15.28■□□□□ 0.04
APLFQ8IW19 AL844908.2-201ENST00000609461 460 ntBASIC15.28■□□□□ 0.04
APLFQ8IW19 AL008721.1-201ENST00000609964 604 ntBASIC15.28■□□□□ 0.04
APLFQ8IW19 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.28■□□□□ 0.04
APLFQ8IW19 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
APLFQ8IW19 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
APLFQ8IW19 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 AC140479.7-201ENST00000636301 2332 ntBASIC15.28■□□□□ 0.04
APLFQ8IW19 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
APLFQ8IW19 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.28■□□□□ 0.04
APLFQ8IW19 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.28■□□□□ 0.04
APLFQ8IW19 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
APLFQ8IW19 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.28■□□□□ 0.04
APLFQ8IW19 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
APLFQ8IW19 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
APLFQ8IW19 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
APLFQ8IW19 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
APLFQ8IW19 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
APLFQ8IW19 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.27■□□□□ 0.04
APLFQ8IW19 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
APLFQ8IW19 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
APLFQ8IW19 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
APLFQ8IW19 AC073439.1-201ENST00000624121 1774 ntBASIC15.27■□□□□ 0.04
APLFQ8IW19 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
APLFQ8IW19 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms