Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2B3Q16720 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2B3Q16720 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2B3Q16720 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP2B3Q16720 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP2B3Q16720 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP2B3Q16720 AC112693.3-201ENST00000624819 1983 ntBASIC18.72■□□□□ 0.59
ATP2B3Q16720 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 SSR4P1-203ENST00000599569 2260 ntBASIC18.71■□□□□ 0.59
ATP2B3Q16720 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 REXO1L4P-201ENST00000605109 1937 ntBASIC18.71■□□□□ 0.59
ATP2B3Q16720 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 FAM21FP-201ENST00000426241 1131 ntBASIC18.71■□□□□ 0.59
ATP2B3Q16720 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 C18orf15-201ENST00000623680 2534 ntBASIC18.71■□□□□ 0.59
ATP2B3Q16720 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP2B3Q16720 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.71■□□□□ 0.59
ATP2B3Q16720 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.71■□□□□ 0.58
ATP2B3Q16720 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 AL157414.3-201ENST00000624276 1954 ntBASIC18.7■□□□□ 0.58
ATP2B3Q16720 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 YBX1P6-201ENST00000442962 1002 ntBASIC18.7■□□□□ 0.58
ATP2B3Q16720 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.7■□□□□ 0.58
ATP2B3Q16720 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 AL360270.3-201ENST00000609118 1348 ntBASIC18.7■□□□□ 0.58
ATP2B3Q16720 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATP2B3Q16720 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B3Q16720 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2B3Q16720 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B3Q16720 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B3Q16720 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B3Q16720 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
ATP2B3Q16720 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B3Q16720 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP2B3Q16720 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B3Q16720 TMBIM7P-203ENST00000641617 1718 ntBASIC18.69■□□□□ 0.58
ATP2B3Q16720 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B3Q16720 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ATP2B3Q16720 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2B3Q16720 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP2B3Q16720 TPM3P8-201ENST00000330554 643 ntBASIC18.69■□□□□ 0.58
ATP2B3Q16720 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATP2B3Q16720 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2B3Q16720 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B3Q16720 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B3Q16720 MIR1202-201ENST00000408529 83 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms