Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.47■□□□□ 0.23
PPP3CAQ08209 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.47■□□□□ 0.23
PPP3CAQ08209 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.47■□□□□ 0.23
PPP3CAQ08209 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.47■□□□□ 0.23
PPP3CAQ08209 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PPP3CAQ08209 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PPP3CAQ08209 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PPP3CAQ08209 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
PPP3CAQ08209 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.47■□□□□ 0.23
PPP3CAQ08209 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PPP3CAQ08209 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PPP3CAQ08209 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PPP3CAQ08209 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PPP3CAQ08209 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.47■□□□□ 0.23
PPP3CAQ08209 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PPP3CAQ08209 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.47■□□□□ 0.23
PPP3CAQ08209 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PPP3CAQ08209 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PPP3CAQ08209 AC018529.2-202ENST00000611482 3087 ntBASIC16.47■□□□□ 0.23
PPP3CAQ08209 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.46■□□□□ 0.23
PPP3CAQ08209 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PPP3CAQ08209 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.46■□□□□ 0.23
PPP3CAQ08209 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.46■□□□□ 0.23
PPP3CAQ08209 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.46■□□□□ 0.23
PPP3CAQ08209 AP005018.1-201ENST00000525475 301 ntBASIC16.46■□□□□ 0.23
PPP3CAQ08209 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 AP001063.1-201ENST00000568332 529 ntBASIC16.46■□□□□ 0.23
PPP3CAQ08209 AP005019.2-201ENST00000615104 511 ntBASIC16.46■□□□□ 0.23
PPP3CAQ08209 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.46■□□□□ 0.23
PPP3CAQ08209 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PPP3CAQ08209 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 AC023090.2-201ENST00000625182 2110 ntBASIC16.46■□□□□ 0.23
PPP3CAQ08209 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.46■□□□□ 0.23
PPP3CAQ08209 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.23
PPP3CAQ08209 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.46■□□□□ 0.23
PPP3CAQ08209 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PPP3CAQ08209 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PPP3CAQ08209 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
PPP3CAQ08209 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.46■□□□□ 0.22
PPP3CAQ08209 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 ACKR1-201ENST00000368121 1240 ntBASIC16.45■□□□□ 0.22
PPP3CAQ08209 EIF3FP3-201ENST00000434851 1086 ntBASIC16.45■□□□□ 0.22
PPP3CAQ08209 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 AC114812.1-204ENST00000449669 728 ntBASIC16.45■□□□□ 0.22
PPP3CAQ08209 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 DUX4L47-201ENST00000566374 394 ntBASIC16.45■□□□□ 0.22
PPP3CAQ08209 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PPP3CAQ08209 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.45■□□□□ 0.22
PPP3CAQ08209 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPP3CAQ08209 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPP3CAQ08209 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPP3CAQ08209 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPP3CAQ08209 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PPP3CAQ08209 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.44■□□□□ 0.22
PPP3CAQ08209 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPP3CAQ08209 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.44■□□□□ 0.22
PPP3CAQ08209 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.44■□□□□ 0.22
PPP3CAQ08209 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PPP3CAQ08209 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms